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Adenovirus and AAV
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Figure: Low-level contaminant found by sequencing a random selection of subcloned adenovirus from an MVB.

AAV

Bottom: Standard automated sequencing chemistries cannot sequence into the ITR.
Middle: Modified chemistries can sequence into the ITR but result in heavy base compression.
Top: SeqWright utilizes a unique technique for sequencing through the ITR without compression.

 

Adenovirus

SeqWright uses the full-length shotgun approach for sequencing adenovirus. The benefits are increase speed, greater depth of coverage from sequencing multiple subclones, improved ability for detecting low level mutations, and lack of dependence on a pre-existing reference sequence. Our credentials for this service include sequencing the Ad5 genome for the ARMWG (read article).

  • Service includes Ad purification from viral stock through comparative sequence analysis
  • Shotgun sequencing methodology
  • Full-length coverage, double-strand sequencing
  • Average coverage typically exceeds 8x
  • Ability to detect low level mutations
  • 2-3 week turnaround with signed final report

Adeno-Associated Virus (AAV)

Anyone can sequence the transgene. SeqWright can sequence the entire AAV vector construct, including the T-hairpins formed by the ITRs. We have been involved in the sequencing of dozens of novel AAV serotypes, and we have the references to back us up.

  • AAV vector purification from stock
  • Double-strand DNA sequencing
  • Clear delineation of sequence base calls through ITRs

ITR SEQUENCING IS A CUSTOM SERVICE. PLEASE CALL REQUEST A QUOTE BEFORE SENDING SAMPLES.